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Lambda vectors and their replication

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






 !"#
$#

%&
'&(#

&&')('(&#

λ Bacteriophage

**+ 

,-)).'(

&/&
&*+ 0,.&#1
&/2 $3#

4&*+ 
#

*&&&


*+ #



&&
#

+&
&&#

Cont.


.


)
&*+ &
*+ 

.

Enzymes needed:
1.Restriction enzymes: cuts the DNA at specific
sequences to generate a set of fragments
2. DNA ligase: inserts DNA restriction fragments
into replicating DNA molecules to produce
recombinant DNA

Lambda vectors


0(

(5


677###7&7*00708
EcoRI
EcoRI EcoRI
20Kb
cos
cos
cos
cos

limitations

9*+ 


6.&&
&9'(
&
#&
&&/3
&#

6&
&*+


Vector types:
0#Plasmids)*+ 

*+ 
#:

#:
0.'.(
00/#";6
5<=$0>
#Bacteriophage λ− :
*+ #:
"#$
&#:
&0,.#";
λ&0λ? 
<#Cosmids-λ
&#:
*+ 
.&.
&#:,.#
@#Yeast articial chromosomes
(YAC()&
A&B#:&
0.#
Vector Insert size
(kb)
Plasmid <10 kb
Bacteriophage
λ

9-15 kb
Cosmids 33-50 kb
YACS 100-1000 kb


What determines choice of vector?
0# 9
# C9
<# 5
@# $&D

-Central 1/3 is the “stuffer” fragment.
-Segments of the lambda DNA are removed and a stuffer
fragment is put in, this keeps the vector at a correct size



/>/lecture6/

Origin of
replication
*+ &
&9
*+ )

9#4
&/
*+ 



/>ture6

Selective marker
A

#

.

#=
/


.#

/>•
E&

multiple cloning
site (*+ &
A


;(

/>•



&




&#

/>
Brock Biology of Microorganisms, 9
th
Edition
(2000)
Prentice Hall, Madigan, Martinko, Parker
steps in cloning with λ :

Isolate vector DNA and gene of
interest

Cut both with restriction
enzyme(EcoRI)

Connect two fragments of
foreign DNA with DNA ligase.
(recombinant DNA)

Package DNA by adding cell
extracts containing head and
tail proteins

Transfer recombinant
molecules into host cell
(transform)


Grow/select transformants:
check recombinant phage for
the presence of desired foreign
DNA sequence by observing
its genetic properties.

Molecular Biology of the Cell, 3
rd
Edition, Garland Publishing, Inc. 1983

http://www-
micro.msb.le.ac.uk/224/Phages.html#Lambda


)PL '(
λ+
)PR '(&/&cro/
&&
#
-OL and OR )&&
&/#
)cI '(<8##
F5F/&
+/&
F/
&#
-cII cIII
&#
-Cro (88(F5

F/.&&

&#
)N
5#
5+ 
&&/
&*+ 
&
&/#
)Q +/
;
5
)Two Termination sites-F+
$$#

/>•


Life cycle of lambda
0# C
# 5&
<# .+
@# 5.cro 
,# :
&+/&
'.
/'F(G(
8# :;G
#G

#
# $.'&(
># .
'&&(
H# .5'(
&FF5#

How do cells leave lysogeny cycle
and go to lytic cycle?



//5 
;&
#5 #

Which proteins determine the
cycle?

&6



6



DNA lambda replication

&AIJ&5#


*+ F&#

FλKF&&λ '@&B :&(


DNA Replication, W.H. Freeman and Co. (1992)
Kornberg,A.


F&
&&
&#
L
F

L
F
;*
&';
(:
IF)J
'M0*+ (
L
'3(&
&.&
;&'M08(
L
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