Fundamental
Microbiology
CHAPTER 9
Introduction to Infectious disease
and Immunology
Normal Microbiota and the Host
• Loca&ons
of
normal
microbiota
on
and
in
the
human
body
-‐
Skin
and
mucous
-‐
Gastrointes&nal
tract
-‐
Urogenital
tract
• Microbes
that
engage
in
m u t u a l
o r
c o m m e n s a l
a s s o c i a & o n s
–
n o r m a l
(resident)
flora,
indigenous
flora,
microbiota
Includes
bacteria,
fungi,
protozoa
and
arthropods
Normal Microbiota and the Host
• Normal
microbiota
permanently
colonize
the
host
• Symbiosis
is
the
rela&onship
between
normal
microbiota
and
the
host
Normal Microbiota and the Host
• In
commensalism
(Hội
sinh),
one
organism
is
benefited
and
the
other
is
unaffected.
• In
mutualism
(hỗ
sinh),
both
organisms
benefit.
Exp.
Rumen
microbiota
• In
parasi
one
organism
is
benefited
at
the
expense
of
the
other.
Exp.
Enterobacteria
• Some
normal
microbiota
are
opportunis
pathogens
Exp.
E.
coli
What is a role of normal microbiota?
• Normal
microbiota
protect
the
host
by:
– occupying
niches
that
pathogens
might
occupy
– producing
acids
(lac&c
acid
bacteria
in
vagina
– producing
bacteriocins
Principles of Disease and
Epidemiology
• Pathology
Study
of
disease
• Pathogenesis
Development
of
disease
• Infec&on
Coloniza&on
of
the
body
by
pathogens
• Disease
An
abnormal
state
in
which
the
body
is
not
func&onally
normally
Infectious diseases
• Infec
a
condi&on
in
which
pathogenic
microbes
penetrate
host
defenses,
enter
&ssues
and
mul&ply
• Disease
–
An
abnormal
state
in
which
the
body
is
not
func&onally
normally
• Caused
by
microbes
or
their
products
–
infec
disease
Reservoirs of Infection
• Reservoirs
of
infec&on
are
con&nual
sources
of
infec&on.
• Human
—
AIDS,
gonorrhea
• Carriers
may
have
inapparent
infec&ons
or
latent
diseases
• Animal
—
Rabies,
Lyme
disease
• Some
zoonoses
may
be
transmiTed
to
humans
• Nonliving
—
Botulism,
tetanus
• Soil
Koch's Postulates
Transmission of Disease
Contact
Direct
Indirect
Droplet
Requires
close
associa&on
between
infected
and
suscep&ble
host
Spread
by
fomites
Transmission
via
airborne
droplets
Transmission of Disease
Transmission of Disease
• Vehicle
Transmission
by
an
inanimate
reservoir
(food,
water)
• Vectors
Arthropods,
especially
fleas,
&cks,
and
mosquitoes
• Mechanical
Arthropod
carries
pathogen
on
feet
• Biological
Pathogen
reproduces
in
vector
Emerging Infectious Diseases
1
2
1+2
Living
condi&ons
Host
state
1+2+3
disease
1+3
2+3
Pathogenic
microorganism’s
source
3
Disease
triangle
Mechanisms of Pathogenicity
Portals of Entry
How
microorganisms
enter
a
host?
• Mucous
membranes
– Respiratory
tract
– Gastrointes&nal
tract
– Genitourinary
tract
– Conjunc&va
• Skin
– Tough
so
rare
-‐
Necator
americanus
-‐
hookworm
• Parenteral
route
– Puncture,
injec&on,
bites,
cuts,
wounds,
surgery,
etc
1st Portal of Entry: Mucous Membranes -Respiratory
• Respiratory
Tract
– microbes
inhaled
into
mouth
or
nose
in
droplets
of
moisture
or
dust
par9cles
– Easiest
and
most
frequently
traveled
portal
of
entry
•
Common cold
•
Flu
•
Tuberculosis
•
Whooping cough
•
Pneumonia
•
Measles
•
Strep Throat
•
Diphtheria
Mucous
membranes:
G.I.
Tract
• Salmonellosis
(ngộ
đọc
thực
phẩm)
– Salmonella
sp.
• Shigellosis
(lỵ)
– Shigella
sp.
• Cholera
– Vibrio
cholorea
Fecal - Oral Diseases
• Ulcers
(loét
dạ
dày)
• These pathogens enter the G.I. Tract at
– Helicobacter
pylori
one end and exit at the other end.
• Botulism
• Spread by contaminated hands & fingers
– Clostridium
botulinum
or contaminated food & water
• Poor personal hygiene.
Mucous Membranes of the Genitourinary System
Gonorrhea
Neisseria gonorrhoeae
Syphilis (giang mai)
Treponema pallidum
Chlamydia
Chlamydia trachomatis
HIV
Herpes Simplex II
Mucous
Membranes:
Conjunc&va
• Conjunc
–
mucous
membranes
that
cover
the
eyeball
and
lines
the
eyelid
Trachoma
-‐-‐-‐-‐-‐-‐-‐-‐-‐-‐-‐-‐-‐-‐
à
– Chlamydia
trachoma9s
2nd Portal of Entry: Skin
• Skin
-‐
the
largest
organ
of
the
body.
When
unbroken
is
an
effec&ve
barrier
for
most
microorganisms.
• Some
microbes
can
gain
entrance
thru
openings
in
the
skin:
hair
follicles
and
sweat
glands
3rd Portal of Entry: Parenteral
Microorganisms
are
deposited
into
the
&ssues
below
the
skin
or
mucous
membranes
– Punctures
– injec&ons
– bites
– scratches
– surgery
– spligng
of
skin
due
to
swelling
or
dryness
Preferred Portal of Entry
~
Just
because
a
pathogen
enters
your
body
it
does
not
mean
it’s
going
to
cause
disease~
•
Pathogens
-‐
preferred
portal
of
entry
– Small
pox
via
variola&on
– Streptococcus
pneumoniae
• if
inhaled
can
cause
pneumonia
• if
enters
the
G.I.
Tract,
no
disease
– Salmonella
typhi
• if
enters
the
G.I.
Tract
can
cause
Typhoid
Fever
(Thương
hàn)
• if
on
skin,
no
disease